Connect Seqera to Your AI Agent

Ask your AI assistant to work with Seqera: review workflow runs and launch pipelines.

8 tools API key

Try a Seqera Task

Copy a prompt into your agent with the oo Skill installed. Add your page links and source notes before running it.

oo Skill Seqera

Inspect a workflow run

Read a known workflow's details.

/oo Seqera: Get Seqera workflow [workflow ID] and summarize returned status and execution details.

Launch a pipeline workflow

Submit a workflow from a repository or registered pipeline.

/oo Seqera: Launch Seqera pipeline [repository or registered pipeline] with [supported launch settings], then retrieve the returned workflow ID to inspect progress.

Start Working with Seqera

  1. Install OOMOL

    Set up oo CLI and the oo Skill in your agent.

    Install OOMOL →
  2. Connect Seqera

    Connect using your Seqera Access Token.

    Connect Seqera →
  3. Give Your Agent a Task

    Use /oo with the pages to read, the changes to make, and where to save the result.

    Connection Guide →

Choose Your Agent

  • An account with access to the Seqera resources used in your task.

Seqera Tools

Seqera operations give an AI assistant workspace and pipeline context plus workflow launch and status retrieval.

Inspect a workflow run

Read a known workflow's details.

Launch a pipeline workflow

Submit a workflow from a repository or registered pipeline.

8 tools

Get Current User

Retrieve the current Seqera user profile and default workspace information.

seqera.get_current_user

List User Workspaces

List the workspaces and organizations visible to the current Seqera user.

seqera.list_user_workspaces

Get Workspace

Retrieve one Seqera workspace by organization ID and workspace ID.

seqera.get_workspace

List Pipelines

List Seqera pipelines in the current user context or a specific workspace.

seqera.list_pipelines

Get Pipeline

Retrieve one Seqera pipeline by pipeline ID.

seqera.get_pipeline

List Workflows

List Seqera workflow runs in the current user context or a specific workspace.

seqera.list_workflows

Get Workflow

Retrieve one Seqera workflow run by workflow ID.

seqera.get_workflow

Launch Workflow

Launch a Seqera workflow from a pipeline repository or registered pipeline.

seqera.launch_workflow

Frequently Asked Questions

Does launch mean all computation finished?

Launch submits a workflow; retrieve the workflow for subsequent status.

Can I connect self-hosted Seqera?

The connection accepts an optional apiBaseUrl for your Seqera Platform API.

Can I list accessible workspaces?

list_user_workspaces returns visible workspaces and organizations.

Connect Seqera

About Seqera ↗