Connect Europe PMC to Your AI Agent

Build a sourced reading list around your research question.

14 tools No auth

Try a Europe PMC Task

Copy a prompt into your agent with the oo Skill installed. Add your page links and source notes before running it.

oo Skill Europe PMC

Compare literature on a research question

Find relevant publications and compare their accessible evidence.

/oo Europe PMC: Search Europe PMC for [research question and date criteria]. Read selected publication records and available open-access full text by PMCID. Compare findings and limitations, citing source IDs and distinguishing abstract-only observations from full-text evidence.

Check publication context

Review related literature, evaluations and status updates for selected papers.

/oo Europe PMC: For Europe PMC publication [source and ID], inspect references, citations and linked evaluations. Check status updates for [article IDs] and summarize any recorded retraction, withdrawal or version changes with source references.

Start Working with Europe PMC

  1. Install OOMOL

    Set up oo CLI and the oo Skill in your agent.

    Install OOMOL →
  2. Connect Europe PMC

    No account credentials are required for the public Europe PMC operations.

    Connect Europe PMC →
  3. Give Your Agent a Task

    Use /oo with the pages to read, the changes to make, and where to save the result.

    Connection Guide →

Choose Your Agent

  • Provide a research query or the publication source and ID. Full-text retrieval requires a PMCID.
  • Full-text XML is available for articles in the open-access subset. A searchable record does not guarantee accessible full text.

Europe PMC Tools

Search literature and preprints, retrieve publication records and available open-access full text, and inspect references, citations and evaluations. AI can compare the evidence it reads while preserving source identifiers and publication status.

Literature and publication context

Read publication evidence and inspect references, citations, evaluations and status updates.

Annotations, data links and grants

Discover linked datasets, text-mined entities or relationships and research grants.

14 tools

Search Publications

Search Europe PMC literature and preprints with its official query syntax and cursor pagination.

europe_pmc.search_publications

Get Publication

Get one Europe PMC publication by its source code and identifier.

europe_pmc.get_publication

Get References

Get publications referenced by one Europe PMC publication.

europe_pmc.get_references

Get Citations

Get publications that cite one Europe PMC publication.

europe_pmc.get_citations

Get Data Links

Get consolidated data, text-mined, and external links associated with one Europe PMC publication.

europe_pmc.get_data_links

Get Full Text Xml

Get JATS XML full text for a PubMed Central article in the Europe PMC open-access subset.

europe_pmc.get_full_text_xml

Get Evaluations

Get linked peer reviews and evaluations for one Europe PMC publication version.

europe_pmc.get_evaluations

Check Article Status

Check a batch of Europe PMC articles or preprints for publication, version, withdrawal, removal, and retraction updates.

europe_pmc.check_article_status

Get Annotations By Articles

Get text-mined entities and relationships for up to eight Europe PMC articles in one request.

europe_pmc.get_annotations_by_articles

Search Annotations By Entity

Find Europe PMC articles containing annotations for a named biological entity.

europe_pmc.search_annotations_by_entity

Search Annotations By Relationship

Find Europe PMC articles containing a text-mined relationship between two named entities.

europe_pmc.search_annotations_by_relationship

Search Annotations By Provider

Find Europe PMC articles containing annotations from a named provider.

europe_pmc.search_annotations_by_provider

Search Annotations By Section Or Type

Find Europe PMC articles by annotation type, article section, or both in one cursor search.

europe_pmc.search_annotations_by_section_or_type

Search Grants

Search Europe PMC research grants by funder, investigator, institution, topic, date, or other official GRIST fields.

europe_pmc.search_grants

Frequently Asked Questions

How should I scope a literature search?

Provide the research question, terms and relevant dates. Europe PMC query syntax can further specify publication and field criteria.

What references should a summary include?

Keep each publication’s source and ID, title and available links. State whether the analysis used an abstract or the accessible full text.

Are text-mined relationships established findings?

Annotations locate mentions and relationships in the indexed text. Read the relevant passage and study context before interpreting them as evidence.

Connect Europe PMC

About Europe PMC ↗